ELIZA cgi-bash version rev. 1.90
- Medical English LInking keywords finder for the PubMed Zipped Archive (ELIZA) -

return kwic search for findings out of >500 occurrences
299123 occurrences (No.77 in the rank) during 5 years in the PubMed. [no cache] 500 found
403) These findings will assist to understand the mechanism of inhibition of SAP-1 for different proteases and provide intimation for further research.
--- ABSTRACT ---
PMID:24261636 DOI:10.1080/07391102.2013.855882
2015 Journal of biomolecular structure & dynamics
* Studies on the interactions of SAP-1 (an N-terminal truncated form of cystatin S) with its binding partners by CD-spectroscopic and molecular docking methods.
- SAP-1 is a 113 amino acid long single-chain protein which belongs to the type 2 cystatin gene family. In our previous study, we have purified SAP-1 from human seminal plasma and observed its cross-class inhibitory property. At this time, we report the interaction of SAP-1 with diverse proteases and its binding partners by CD-spectroscopic and molecular docking methods. The circular dichroism (CD) spectroscopic studies demonstrate that the conformation of SAP-1 is changed after its complexation with proteases, and the alterations in protein secondary structure are quantitatively calculated with increase of α-helices and reduction of β-strand content. To get insight into the interactions between SAP-1 and proteases, we make an effort to model the three-dimensional structure of SAP-1 by molecular modeling and verify its stability and viability through molecular dynamics simulations and finally complexed with different proteases using ClusPro 2.0 Server. A high degree of shape complementarity is examined within the complexes, stabilized by a number of hydrogen bonds (HBs) and hydrophobic interactions. Using HB analyses in different protein complexes, we have identified a series of key residues that may be involved in the interactions between SAP-1 and proteases. These findings will assist to understand the mechanism of inhibition of SAP-1 for different proteases and provide intimation for further research.
--- ABSTRACT END ---
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(1)88 suggest (15)10 revealed (29)3 for (43)2 during
(2)27 indicate (16)9 may (30)3 highlighted (44)2 give
(3)24 of (17)8 show (31)3 imply (45)2 hold
(4)23 *null* (18)7 showed (32)3 indicated (46)2 implicate
(5)23 from (19)7 underscore (33)3 regarding (47)2 into
(6)17 are (20)6 to (34)3 that (48)2 is
(7)17 support (21)5 suggested (35)3 the (49)2 lend
(8)14 provide (22)4 also (36)3 will (50)2 or
(9)12 have (23)4 included (37)2 add (51)2 point
(10)12 highlight (24)4 on (38)2 at (52)2 provided
(11)12 in (25)4 reveal (39)2 by (53)2 related
(12)12 were (26)4 we (40)2 call (54)2 should
(13)11 and (27)3 could (41)2 confirm (55)2 suggesting
(14)10 demonstrate (28)3 demonstrated (42)2 contribute (56)2 suggestive

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--- WordNet output for findings --- =>研究(調査)結果 Overview of noun findings The noun findings has 1 sense (no senses from tagged texts) 1. findings -- (a collection of tools and other articles used by an artisan to make jewelry or clothing or shoes) Overview of noun finding The noun finding has 3 senses (first 3 from tagged texts) 1. (16) determination, finding -- (the act of determining the properties of something, usually by research or calculation; "the determination of molecular structures") 2. (3) finding -- (the decision of a court on issues of fact or law) 3. (1) finding -- (something that is found; "the findings in the gastrointestinal tract indicate that he died several hours after dinner"; "an area rich in archaeological findings") --- WordNet end ---